BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C08SP1|AL427138
(990 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig145 1918 0.0
>3x_Contig145
Length = 1450
Score = 1918 bits (967), Expect = 0.0
Identities = 989/993 (99%), Gaps = 3/993 (0%)
Strand = Plus / Plus
Query: 1 gatcgtcctgtggaataatggtattccatccaatttcgggaacacttttaccttcactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gatcgtcctgtggaataatggtattccatccaatttcgggaacacttttaccttcactga 256
Query: 61 tatcaaatttggacaaagtacctgggattaaacctaaccctctgcttgaaggagattcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatcaaatttggacaaagtacctgggattaaacctaaccctctgcttgaaggagattcag 316
Query: 121 aagatccatcgaaaagcgcttgcaagccaacacaaatacccatcaacggccttccggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aagatccatcgaaaagcgcttgcaagccaacacaaatacccatcaacggccttccggatg 376
Query: 181 caatataatctttgataggttgctcaaacccacgagaagttaagttatcgacaaaatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caatataatctttgataggttgctcaaacccacgagaagttaagttatcgacaaaatggc 436
Query: 241 caaaattaccgacacctggcaggatgattctttcagcagtttgtaactctggatctgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caaaattaccgacacctggcaggatgattctttcagcagtttgtaactctggatctgaag 496
Query: 301 cagacttgattaatcttgtctcgtaacctaaatgattgatagcattctgcaaggattgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cagacttgattaatcttgtctcgtaacctaaatgattgatagcattctgcaaggattgca 556
Query: 361 aattaccagattccacatcaataatatgcacgactgtcattgtgatttactgtagtcgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aattaccagattccacatcaataatatgcacgactgtcattgtgatttactgtagtcgct 616
Query: 421 accagtcgtttgctgtttatcctttgaaatctcttgctgacgatatatcctcatcgatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 accagtcgtttgctgtttatcctttgaaatctcttgctgacgatatatcctcatcgatac 676
Query: 481 acttgtatttcataagattagattcgttagttctgtattttctattattttaaaaaaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acttgtatttcataagattagattcgttagttctgtattttctattattttaaaaaaaaa 736
Query: 541 ttaaaccttttcgaaacttcagaagagaatcagagagtgagtcattgacagggttcaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttaaaccttttcgaaacttcagaagagaatcagagagtgagtcattgacagggttcaagt 796
Query: 601 taaaatgagttgttgaaatcagtcattgacaatccaccaacccattctgctgttaactta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 taaaatgagttgttgaaatcagtcattgacaatccaccaacccattctgctgttaactta 856
Query: 661 taatgttcttgctagagttttattaaaacg-agcccatgattttttttatctattcatgt 719
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 857 taatgttcttgctagagttttattaaaacgaagcccatgattttttttatctattcatgt 916
Query: 720 ctttccgtgttgtaattagactattatatacaaatcgttaaattcagcaattgaacgaaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 ctttccgtgttgtaattagactattatatacaaatcgttaaattcagcaattgaacgaaa 976
Query: 780 agattatttaaataaaaacgtgtttcaaatgggtactcaggtattcatatgttttctttt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 agattatttaaataaaaacgtgtttcaaatgggtactcaggtattcatatgttttctttt 1036
Query: 840 atgattattgatatgaagtttattcagtgttcttcttttttagttctcttcttgctctaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 atgattattgatatgaagtttattcagtgttcttcttttttagttctcttcttgctctaa 1096
Query: 900 ctgctgcagccaattttcttagtacttcagcagttgtttccaaacttatacatccatctg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 ctgctgcagccaattttcttagtacttcagcagttgtttccaaacttatacatccatctg 1156
Query: 960 tgatagaaama-cgtatttcaaa-cagctttac 990
||||||||| | ||||||||||| |||||||||
Sbjct: 1157 tgatagaaacaccgtatttcaaaccagctttac 1189
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9524
Number of Sequences: 1807
Number of extensions: 9524
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 990
length of database: 10,358,551
effective HSP length: 16
effective length of query: 974
effective length of database: 10,329,639
effective search space: 10061068386
effective search space used: 10061068386
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)